Transcript: lnc-KANTR-23:2

Basic information

LNCipedia transcript ID: lnc-KANTR-23:2 
LNCipedia gene ID: lnc-KANTR-23
Location (hg19): chrX:53123327-53152924
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 489 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: NONHSAT137137; ENST00000605526.1; ENST00000605526.5
Alternative gene names: ENSG00000232593.2; LINC01155; ENSG00000232593.6; KANTR; Spasm


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KANTR-23:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TSPYL2-1:3
4.0 KANTR:2
4.1 KANTR:2
5.0 KANTR:2
5.1 lnc-TSR2-23:2
5.2 lnc-KANTR-23:2