Transcript: lnc-KANTR-23:24

Basic information

LNCipedia transcript ID: lnc-KANTR-23:24 
LNCipedia gene ID: lnc-KANTR-23
Location (hg19): chrX:53172491-53196601
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 522 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT137151
Alternative gene names: Spasm


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.3863 non-coding 
CPAT coding probability 1.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KANTR-23:24 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TSPYL2-1:12
4.0 KANTR:13
4.1 KANTR:13
5.0 KANTR:13
5.1 lnc-TSR2-23:24
5.2 lnc-KANTR-23:24