Transcript: lnc-KANTR-23:9

Basic information

LNCipedia transcript ID: lnc-KANTR-23:9 
LNCipedia gene ID: lnc-KANTR-23
Location (hg19): chrX:53123333-53179296
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 8613 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232593.2|FTMT29100031091.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 98.4595 coding 
CPAT coding probability 45.65% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KANTR-23:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 KANTR:20
5.0 KANTR:20
5.1 lnc-TSR2-23:9
5.2 lnc-KANTR-23:9