Transcript: lnc-KAT2B-12:1

Basic information

LNCipedia transcript ID: lnc-KAT2B-12:1 
LNCipedia gene ID: lnc-KAT2B-12
Location (hg19): chr3:21447218-21448177
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 960 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT088639; NR_002311
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 72.4718 coding 
CPAT coding probability 73.28% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KAT2B-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KAT2B-12:1
4.0 lnc-KAT2B-12:1
4.1 lnc-KAT2B-12:1
5.0 lnc-KAT2B-12:1
5.1 lnc-CMC1-41:1
5.2 lnc-KAT2B-12:1