Transcript: lnc-KATNB1-8:1

Basic information

LNCipedia transcript ID: lnc-KATNB1-8:1 
LNCipedia gene ID: lnc-KATNB1-8
Ensembl Gene ID: ENSG00000187185
Ensembl Transcript ID: ENST00000335616
Location (hg19): :-
Strand:
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1317 bp
Exons: 0
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000335616.3
Alternative gene names: ENSG00000187185.4; CTD-2600O9.1; AC092118.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 83.54% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KATNB1-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ADGRG1-8:3
5.1 lnc-ADGRG1-8:3
5.2 lnc-KATNB1-8:1