Transcript: lnc-KCNA4-2:3

Basic information

LNCipedia transcript ID: lnc-KCNA4-2:3 
LNCipedia gene ID: lnc-KCNA4-2
Location (hg19): chr11:30338482-30344533
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 424 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019599; NONHSAT018585
Alternative gene names: XLOC_009402; linc-KCNA4-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -428.2317 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNA4-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MPPED2-2:1
3.1 lnc-MPPED2-2:1
4.0 lnc-MPPED2-2:1
4.1 lnc-KCNA4-2:3
5.0 lnc-KCNA4-2:3
5.1 lnc-CSTF3-38:1
5.2 lnc-KCNA4-2:3