Transcript: lnc-KCNC3-1:4

Basic information

LNCipedia transcript ID: lnc-KCNC3-1:4 
LNCipedia gene ID: lnc-KCNC3-1
Location (hg19): chr19:50837057-50848018
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1343 bp
Exons: 9
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000527780
Alternative gene names: ENSG00000131401; NAPSB


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -189.4652 non-coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KCNC3-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KCNC3-1:4
3.1 lnc-KCNC3-1:4
4.0 lnc-KCNC3-1:4
4.1 lnc-KCNC3-1:4
5.0 lnc-KCNC3-1:4
5.1 lnc-FAM71E1-9:4
5.2 lnc-KCNC3-1:4