Transcript: lnc-KCNE1B-1:2

Basic information

LNCipedia transcript ID: lnc-KCNE1B-1:2 
LNCipedia gene ID: lnc-KCNE1B-1
Location (hg19): chr21:10582484-10599892
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 617 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00029076
Alternative gene names: XLOC_013998; linc-LOC100132288-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.6372 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNE1B-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TPTE-1:1
3.1 lnc-TPTE-1:1
4.0 lnc-TPTE-1:1
4.1 lnc-TPTE-1:1
5.0 lnc-TPTE-1:1
5.1 lnc-N6AMT1-147:2
5.2 lnc-KCNE1B-1:2