Transcript: lnc-KCNE1B-3:1

Basic information

LNCipedia transcript ID: lnc-KCNE1B-3:1 
LNCipedia gene ID: lnc-KCNE1B-3
Location (hg19): chr21:9826551-9827720
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1076 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029069; NONHSAT081050
Alternative gene names: XLOC_013994; linc-S100B-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 40.5012 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNE1B-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TPTE-3:1
3.1 lnc-TPTE-3:2
4.0 lnc-TPTE-3:2
4.1 lnc-TPTE-3:2
5.0 lnc-TPTE-3:2
5.1 lnc-N6AMT1-153:1
5.2 lnc-KCNE1B-3:1