Transcript: lnc-KCNIP1-5:1

Basic information

LNCipedia transcript ID: lnc-KCNIP1-5:1 
LNCipedia gene ID: lnc-KCNIP1-5
Location (hg19): chr5:169764281-169765965
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1685 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235172.3|FTMT22000010771.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -136.5724 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNIP1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KCNIP1-5:1
5.0 lnc-KCNIP1-5:1
5.1 lnc-ATP6V0E1-85:1
5.2 lnc-KCNIP1-5:1