Transcript: lnc-KCNIP4-2:2

Basic information

LNCipedia transcript ID: lnc-KCNIP4-2:2 
LNCipedia gene ID: lnc-KCNIP4-2
Location (hg19): chr4:22394168-22414938
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 280 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT095757
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -243.999 non-coding 
CPAT coding probability 10.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNIP4-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KCNIP4-2:2
4.0 lnc-KCNIP4-2:2
4.1 lnc-KCNIP4-2:2
5.0 lnc-KCNIP4-2:2
5.1 lnc-AFAP1-109:2
5.2 lnc-KCNIP4-2:2