Transcript: lnc-KCNJ15-3:1

Basic information

LNCipedia transcript ID: lnc-KCNJ15-3:1 
LNCipedia gene ID: lnc-KCNJ15-3
Location (hg19): chr21:39875486-39881231
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 955 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000056050.1|MICT00000226057.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -46.0387 non-coding 
CPAT coding probability 10.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNJ15-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KCNJ15-3:1
5.0 lnc-KCNJ15-3:1
5.1 lnc-SIM2-52:1
5.2 lnc-KCNJ15-3:1