Transcript: lnc-KCNJ6-9:1

Basic information

LNCipedia transcript ID: lnc-KCNJ6-9:1 
LNCipedia gene ID: lnc-KCNJ6-9
Location (hg19): chr21:39607731-39608758
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1028 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_68_NR_033800
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.8437 non-coding 
CPAT coding probability 2.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNJ6-9:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DSCR4-9:1
4.0 lnc-DSCR4-9:1
4.1 lnc-DSCR4-9:1
5.0 lnc-DSCR4-9:1
5.1 lnc-CRYZL1-65:1
5.2 lnc-KCNJ6-9:1