Transcript: lnc-KCNN2-2:6

Basic information

LNCipedia transcript ID: lnc-KCNN2-2:6 
LNCipedia gene ID: lnc-KCNN2-2
Location (hg19): chr5:113391702-113392871
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 571 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000251628.1|ENST00000512927.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -294.9536 non-coding 
CPAT coding probability 3.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KCNN2-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KCNN2-2:6
5.0 lnc-KCNN2-2:6
5.1 lnc-AP3S1-32:4
5.2 lnc-KCNN2-2:6