Transcript: lnc-KCTD19-1:2

Basic information

LNCipedia transcript ID: lnc-KCTD19-1:2 
LNCipedia gene ID: lnc-KCTD19-1
Location (hg19): chr16:67296237-67298386
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2150 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA547:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 99.2831 coding 
CPAT coding probability 5.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KCTD19-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-KCTD19-1:2
4.1 lnc-KCTD19-1:2
5.0 lnc-KCTD19-1:2
5.1 lnc-PSMB10-18:2
5.2 lnc-KCTD19-1:2