Transcript: lnc-KDM4B-7:2

Basic information

LNCipedia transcript ID: lnc-KDM4B-7:2 
LNCipedia gene ID: lnc-KDM4B-7
Ensembl Gene ID: ENSG00000274447
Ensembl Transcript ID: ENST00000619774
Location (hg19): chr19:5294258-5294707
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 450 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000619774.1
Alternative gene names: ENSG00000274447.1; LLNLR-304G9.1; AC005790.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -113.3526 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KDM4B-7:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-KDM4B-7:2
4.1 lnc-KDM4B-7:2
5.0 lnc-KDM4B-7:2
5.1 lnc-RPL36-17:3
5.2 lnc-KDM4B-7:2