Transcript: lnc-KDM4C-216:1

Basic information

LNCipedia transcript ID: lnc-KDM4C-216:1 
LNCipedia gene ID: lnc-KDM4C-216
RefSeq ID: NR_135135
Location (hg19): chr9:9799392-9803791
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 421 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135135.1
Alternative gene names: LOC105375972


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -217.4215 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KDM4C-216:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-RECK-216:1
5.1 lnc-RECK-216:1
5.2 lnc-KDM4C-216:1