Transcript: lnc-KHDRBS3-5:3

Basic information

LNCipedia transcript ID: lnc-KHDRBS3-5:3 
LNCipedia gene ID: lnc-KHDRBS3-5
Location (hg19): chr8:135768684-135779490
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2043 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015369; NONHSAT129261
Alternative gene names: XLOC_006934; linc-KHDRBS3-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.7001 non-coding 
CPAT coding probability 20.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KHDRBS3-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KHDRBS3-5:3
3.1 lnc-KHDRBS3-5:3
4.0 lnc-KHDRBS3-5:3
4.1 lnc-KHDRBS3-5:3
5.0 lnc-KHDRBS3-5:3
5.1 lnc-MYC-62:5
5.2 lnc-KHDRBS3-5:3