Transcript: lnc-KIAA0040-2:2

Basic information

LNCipedia transcript ID: lnc-KIAA0040-2:2 
LNCipedia gene ID: lnc-KIAA0040-2
Location (hg19): chr1:175126123-175161949
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4510 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000545251
Alternative gene names: ENSG00000235750; KIAA0040


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1124.9507 coding 
CPAT coding probability 24.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KIAA0040-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TNR-2:2
3.1 lnc-TNR-2:2
4.0 lnc-TNR-2:2
4.1 lnc-TNR-2:2
5.0 lnc-TNR-2:2
5.1 lnc-SH2D1B-137:2
5.2 lnc-KIAA0040-2:2