Transcript: lnc-KIAA0825-1:4

Basic information

LNCipedia transcript ID: lnc-KIAA0825-1:4 
LNCipedia gene ID: lnc-KIAA0825-1
Ensembl Gene ID: ENSG00000270133
Ensembl Transcript ID: ENST00000514061
Location (hg19): chr5:93947611-93953827
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 409 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT102827; ENST00000514061.2
Alternative gene names: ENSG00000270133.1; CTC-303L1.2; AC025766.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -147.2858 non-coding 
CPAT coding probability 1.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIAA0825-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MCTP1-1:1
4.0 lnc-MCTP1-1:1
4.1 lnc-KIAA0825-1:4
5.0 lnc-KIAA0825-1:4
5.1 lnc-ANKRD34B-187:3
5.2 lnc-KIAA0825-1:4