Transcript: lnc-KIAA1147-5:1

Basic information

LNCipedia transcript ID: lnc-KIAA1147-5:1 
LNCipedia gene ID: lnc-KIAA1147-5
Ensembl Gene ID: ENSG00000204990
Ensembl Transcript ID: ENST00000461145
Location (hg19): chr7:141114183-141116190
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1439 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00013267; ENST00000461145; ENST00000461145.1; RP5-842K16.1-001; OTTHUMT00000348910.1; NONHSAT123711
Alternative gene names: XLOC_006624; linc-MRPS33-3; ENSG00000204990; RP5-842K16.1; ENSG00000204990.3; OTTHUMG00000157467.1; AC005692.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -123.9721 non-coding 
CPAT coding probability 13.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIAA1147-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIAA1147-3:1
3.1 lnc-KIAA1147-5:1
4.0 lnc-KIAA1147-5:1
4.1 lnc-KIAA1147-5:1
5.0 lnc-KIAA1147-5:1
5.1 lnc-BRAF-11:1
5.2 lnc-KIAA1147-5:1