Transcript: lnc-KIAA1257-1:4

Basic information

LNCipedia transcript ID: lnc-KIAA1257-1:4 
LNCipedia gene ID: lnc-KIAA1257-1
Ensembl Gene ID: ENSG00000261159
Ensembl Transcript ID: ENST00000567253
Location (hg19): chr3:128578559-128579369
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 811 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000567253.1; RP11-723O4.9-001; OTTHUMT00000431061.1; NONHSAT091955
Alternative gene names: ENSG00000261159.1; RP11-723O4.9; OTTHUMG00000175779.1; AC112484.4; AC112484.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.779 non-coding 
CPAT coding probability 41.60% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KIAA1257-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIAA1257-2:1
4.0 lnc-KIAA1257-1:4
4.1 lnc-KIAA1257-1:4
5.0 lnc-KIAA1257-1:4
5.1 lnc-KIAA1257-1:4
5.2 lnc-KIAA1257-1:4