Transcript: lnc-KIF26A-5:2

Basic information

LNCipedia transcript ID: lnc-KIF26A-5:2 
LNCipedia gene ID: lnc-KIF26A-5
Ensembl Gene ID: ENSG00000258913
Ensembl Transcript ID: ENST00000553757
Location (hg19): chr14:104689921-104754406
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 537 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000553757; ENST00000553757.1; RP11-260M19.2-001; OTTHUMT00000410577.2; NONHSAT040250
Alternative gene names: ENSG00000258913; RP11-260M19.2; ENSG00000258913.1; OTTHUMG00000170825.2; C14orf144; AL590079.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -59.5012 non-coding 
CPAT coding probability 3.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIF26A-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C14orf144-1:2
3.1 lnc-C14orf144-1:2
4.0 lnc-C14orf144-1:2
4.1 lnc-C14orf144-1:2
5.0 lnc-C14orf144-1:2
5.1 lnc-INF2-7:2
5.2 lnc-KIF26A-5:2