Transcript: lnc-KIFC2-2:2

Basic information

LNCipedia transcript ID: lnc-KIFC2-2:2 
LNCipedia gene ID: lnc-KIFC2-2
Location (hg19): chr8:145703379-145705868
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1128 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015381; NONHSAT129763
Alternative gene names: XLOC_006962; linc-PPP1R16A


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.3485 non-coding 
CPAT coding probability 3.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIFC2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIFC2-1:1
3.1 lnc-KIFC2-1:1
4.0 lnc-KIFC2-1:1
4.1 lnc-KIFC2-1:1
5.0 lnc-KIFC2-1:1
5.1 lnc-GPT-4:2
5.2 lnc-KIFC2-2:2