Transcript: lnc-KIRREL1-2:2

Basic information

LNCipedia transcript ID: lnc-KIRREL1-2:2 
LNCipedia gene ID: lnc-KIRREL1-2
RefSeq ID: NR_135760
Location (hg19): chr1:157895757-157918861
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1048 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135760.1
Alternative gene names: LOC105371458


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 77.4408 coding 
CPAT coding probability 0.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KIRREL1-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-APCS-15:2
5.1 lnc-APCS-15:2
5.2 lnc-KIRREL1-2:2