Transcript: lnc-KLF15-3:4

Basic information

LNCipedia transcript ID: lnc-KLF15-3:4 
LNCipedia gene ID: lnc-KLF15-3
Location (hg19): chr3:125984933-125994041
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1133 bp
Exons: 5
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00007249; NONHSAT091659
Alternative gene names: XLOC_003234; linc-ALDH1L1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -65.414 non-coding 
CPAT coding probability 33.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLF15-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KLF15-2:4
3.1 lnc-KLF15-3:4
4.0 lnc-KLF15-3:4
4.1 lnc-KLF15-3:4
5.0 lnc-KLF15-3:4
5.1 lnc-SLC41A3-3:7
5.2 lnc-KLF15-3:4