Transcript: lnc-KLF4-10:2

Basic information

LNCipedia transcript ID: lnc-KLF4-10:2 
LNCipedia gene ID: lnc-KLF4-10
Location (hg19): chr9:110399205-110400005
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 801 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000109367.1|ENCT00000459321.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -241.7733 non-coding 
CPAT coding probability 4.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLF4-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AL162389.1-10:1
5.0 lnc-AL162389.1-10:1
5.1 lnc-SLC46A2-78:1
5.2 lnc-KLF4-10:2