Transcript: lnc-KLHL18-7:2

Basic information

LNCipedia transcript ID: lnc-KLHL18-7:2 
LNCipedia gene ID: lnc-KLHL18-7
Location (hg19): chr3:47180864-47260609
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2539 bp
Exons: 7
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_4033_NR_033373
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.8836 non-coding 
CPAT coding probability 20.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLHL18-7:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NBEAL2-2:2
4.0 lnc-KLHL18-7:2
4.1 lnc-KLHL18-7:2
5.0 lnc-KLHL18-7:2
5.1 lnc-RTP3-20:2
5.2 lnc-KLHL18-7:2