Transcript: lnc-KLHL32-4:4

Basic information

LNCipedia transcript ID: lnc-KLHL32-4:4 
LNCipedia gene ID: lnc-KLHL32-4
Location (hg19): chr6:98264577-98417406
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 339 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012549; NONHSAT114097
Alternative gene names: XLOC_005397; linc-POU3F2-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.3324 non-coding 
CPAT coding probability 7.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLHL32-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KLHL32-3:4
3.1 lnc-KLHL32-4:4
4.0 lnc-KLHL32-4:4
4.1 lnc-KLHL32-4:4
5.0 lnc-KLHL32-4:4
5.1 lnc-PM20D2-65:37
5.2 lnc-KLHL32-4:4