Transcript: lnc-KLHL32-4:8

Basic information

LNCipedia transcript ID: lnc-KLHL32-4:8 
LNCipedia gene ID: lnc-KLHL32-4
Ensembl Gene ID: ENSG00000271860
Ensembl Transcript ID: ENST00000606913
Location (hg19): chr6:98333377-98846739
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 812 bp
Exons: 5
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000606913.1; ENST00000606913.5
Alternative gene names: ENSG00000271860.1; RP11-436D23.1; ENSG00000271860.6; AL589740.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.7837 non-coding 
CPAT coding probability 2.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLHL32-4:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLHL32-4:8
4.0 lnc-KLHL32-4:8
4.1 lnc-KLHL32-4:8
5.0 lnc-KLHL32-4:8
5.1 lnc-PM20D2-65:41
5.2 lnc-KLHL32-4:8