Transcript: lnc-KLHL5-2:1

Basic information

LNCipedia transcript ID: lnc-KLHL5-2:1 
LNCipedia gene ID: lnc-KLHL5-2
Location (hg19): chr4:39205761-39213255
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 3861 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_2632_chr4:39205760-39210822_prostate
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 23.8105 non-coding 
CPAT coding probability 2.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLHL5-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLHL5-2:1
4.0 lnc-KLHL5-2:1
4.1 lnc-KLHL5-2:1
5.0 lnc-KLHL5-2:1
5.1 lnc-GABRB1-64:1
5.2 lnc-KLHL5-2:1