Transcript: lnc-KLRF2-1:1

Basic information

LNCipedia transcript ID: lnc-KLRF2-1:1 
LNCipedia gene ID: lnc-KLRF2-1
Ensembl Gene ID: ENSG00000255882
Ensembl Transcript ID: ENST00000545258
Location (hg19): chr12:10019626-10022407
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 719 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000545258.1; RP11-290C10.1-001; OTTHUMT00000399543.1; NONHSAT026853
Alternative gene names: ENSG00000255882.1; RP11-290C10.1; OTTHUMG00000168395.1; AC091814.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.1315 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLRF2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLRF2-1:1
4.0 lnc-KLRF2-1:1
4.1 lnc-KLRF2-1:1
5.0 lnc-KLRF2-1:1
5.1 lnc-A2ML1-17:1
5.2 lnc-KLRF2-1:1