Transcript: lnc-KMT2B-2:1

Basic information

LNCipedia transcript ID: lnc-KMT2B-2:1 
LNCipedia gene ID: lnc-KMT2B-2
Location (hg19): chr19:36195456-36204307
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 559 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000426659.1; AD000671.1-002; OTTHUMT00000109489.1
Alternative gene names: ENSG00000239352.1; AD000671.1; OTTHUMG00000048117.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -151.805 non-coding 
CPAT coding probability 2.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KMT2B-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZBTB32-2:2
4.0 lnc-ZBTB32-2:2
4.1 lnc-ZBTB32-2:2
5.0 lnc-ZBTB32-2:2
5.1 lnc-GPR42-31:2
5.2 lnc-KMT2B-2:1