Transcript: lnc-KNSTRN-2:2

Basic information

LNCipedia transcript ID: lnc-KNSTRN-2:2 
LNCipedia gene ID: lnc-KNSTRN-2
Location (hg19): chr15:40666599-40668192
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1594 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000567002.1; RP11-64K12.10-001; OTTHUMT00000421196.1; NONHSAT041836
Alternative gene names: ENSG00000261374.1; RP11-64K12.10; OTTHUMG00000172894.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -60.9822 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KNSTRN-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DISP2-2:1
4.0 lnc-DISP2-2:1
4.1 lnc-DISP2-2:1
5.0 lnc-DISP2-2:1
5.1 lnc-TMEM62-61:2
5.2 lnc-KNSTRN-2:2