Transcript: lnc-KRBA1-3:1

Basic information

LNCipedia transcript ID: lnc-KRBA1-3:1 
LNCipedia gene ID: lnc-KRBA1-3
Location (hg19): chr7:149368637-149373275
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1223 bp
Exons: 8
Sources: Nielsen et al.,2014
Alternative transcript names: l_3504_chr7:149368636-149373275_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 28.1494 non-coding 
CPAT coding probability 86.96% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KRBA1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KRBA1-3:1
4.0 lnc-KRBA1-3:1
4.1 lnc-KRBA1-3:1
5.0 lnc-KRBA1-3:1
5.1 lnc-ATP6V0E2-13:1
5.2 lnc-KRBA1-3:1