Transcript: lnc-KRR1-4:20

Basic information

LNCipedia transcript ID: lnc-KRR1-4:20 
LNCipedia gene ID: lnc-KRR1-4
Location (hg19): chr12:76083364-76084611
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 211 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020847; NONHSAT029541
Alternative gene names: XLOC_010132; linc-KRR1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -136.3672 non-coding 
CPAT coding probability 1.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KRR1-4:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KRR1-1:1
3.1 lnc-KRR1-2:4
4.0 lnc-PHLDA1-4:5
4.1 lnc-KRR1-4:20
5.0 lnc-KRR1-4:20
5.1 lnc-LRRC10-48:16
5.2 lnc-KRR1-4:20