Transcript: lnc-KRT80-2:6

Basic information

LNCipedia transcript ID: lnc-KRT80-2:6 
LNCipedia gene ID: lnc-KRT80-2
Location (hg19): chr12:52488377-52512002
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4594 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000257989.1|FTMT24500068941.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 44.5175 non-coding 
CPAT coding probability 94.90% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-KRT80-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KRT80-2:6
5.0 lnc-KRT80-2:6
5.1 lnc-FIGNL2-2:4
5.2 lnc-KRT80-2:6