Transcript: lnc-KRTAP9-7-1:3

Basic information

LNCipedia transcript ID: lnc-KRTAP9-7-1:3 
LNCipedia gene ID: lnc-KRTAP9-7-1
Location (hg19): chr17:39558628-39568840
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2200 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000234859.1|ENST00000430006.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -42.3244 non-coding 
CPAT coding probability 20.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KRTAP9-7-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KRTAP9-7-1:3
5.0 lnc-KRTAP9-7-1:3
5.1 lnc-ATP6V0A1-29:1
5.2 lnc-KRTAP9-7-1:3