Transcript: lnc-KY-2:4

Basic information

LNCipedia transcript ID: lnc-KY-2:4 
LNCipedia gene ID: lnc-KY-2
Location (hg19): chr3:134979870-135098660
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 236 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006667; NONHSAT092264
Alternative gene names: XLOC_003263; linc-KY-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -468.7932 non-coding 
CPAT coding probability 3.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KY-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MSL2-2:4
3.1 lnc-KY-2:4
4.0 lnc-KY-2:4
4.1 lnc-KY-2:4
5.0 lnc-KY-2:4
5.1 lnc-MSL2-10:4
5.2 lnc-KY-2:4