Transcript: lnc-LAMTOR5-1:2

Basic information

LNCipedia transcript ID: lnc-LAMTOR5-1:2 
LNCipedia gene ID: lnc-LAMTOR5-1
Location (hg19): chr1:110911021-110915625
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3546 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000509240
Alternative gene names: ENSG00000248310


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.5314 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LAMTOR5-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HBXIP-1:1
3.1 lnc-HBXIP-1:1
4.0 lnc-HBXIP-1:1
4.1 lnc-HBXIP-1:1
5.0 lnc-HBXIP-1:1
5.1 lnc-LAMTOR5-1:1
5.2 lnc-LAMTOR5-1:2