Transcript: lnc-LARGE1-10:1

Basic information

LNCipedia transcript ID: lnc-LARGE1-10:1 
LNCipedia gene ID: lnc-LARGE1-10
Location (hg19): chr22:35060870-35062280
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1411 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003apj_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.1431 non-coding 
CPAT coding probability 4.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LARGE1-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LARGE-10:1
4.0 lnc-LARGE-10:1
4.1 lnc-LARGE-10:1
5.0 lnc-LARGE-10:1
5.1 lnc-APOL3-16:1
5.2 lnc-LARGE1-10:1