Transcript: lnc-LARGE1-9:1

Basic information

LNCipedia transcript ID: lnc-LARGE1-9:1 
LNCipedia gene ID: lnc-LARGE1-9
Location (hg19): chr22:34963419-34965177
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1759 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003apb_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.7227 non-coding 
CPAT coding probability 1.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LARGE1-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LARGE-9:1
4.0 lnc-LARGE-9:1
4.1 lnc-LARGE-9:1
5.0 lnc-LARGE-9:1
5.1 lnc-SYN3-20:1
5.2 lnc-LARGE1-9:1