Transcript: lnc-LARP1B-1:20

Basic information

LNCipedia transcript ID: lnc-LARP1B-1:20 
LNCipedia gene ID: lnc-LARP1B-1
Location (hg19): chr4:129209398-129440611
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 9102 bp
Exons: 10
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000251432.2|HBMT00001072854.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -26.5346 non-coding 
CPAT coding probability 3.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LARP1B-1:20 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LARP1B-1:20
5.0 lnc-LARP1B-1:20
5.1 lnc-ABHD18-5:11
5.2 lnc-LARP1B-1:20