Transcript: lnc-LARP4-1:1

Basic information

LNCipedia transcript ID: lnc-LARP4-1:1 
LNCipedia gene ID: lnc-LARP4-1
Location (hg19): chr12:50760050-50772324
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 683 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_641_chr12:50760049-50768033_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 43.8788 non-coding 
CPAT coding probability 5.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LARP4-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LARP4-1:1
4.0 lnc-LARP4-1:1
4.1 lnc-LARP4-1:1
5.0 lnc-LARP4-1:1
5.1 lnc-DIP2B-3:1
5.2 lnc-LARP4-1:1