Transcript: lnc-LCAT-1:1

Basic information

LNCipedia transcript ID: lnc-LCAT-1:1 
LNCipedia gene ID: lnc-LCAT-1
Location (hg19): chr16:67977450-67978423
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 974 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT143202; ENST00000590594.1
Alternative gene names: ENSG00000267660.1; CTC-479C5.17


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 162.277 coding 
CPAT coding probability 1.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LCAT-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LCAT-1:1
4.0 lnc-LCAT-1:1
4.1 lnc-LCAT-1:1
5.0 lnc-LCAT-1:1
5.1 lnc-LCAT-1:1
5.2 lnc-LCAT-1:1