Transcript: lnc-LCP2-6:1

Basic information

LNCipedia transcript ID: lnc-LCP2-6:1 
LNCipedia gene ID: lnc-LCP2-6
Location (hg19): chr5:169311379-169407452
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 595 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT105030
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.6927 non-coding 
CPAT coding probability 1.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LCP2-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LCP2-6:1
4.0 lnc-LCP2-6:1
4.1 lnc-LCP2-6:1
5.0 lnc-LCP2-6:1
5.1 lnc-PDLIM7-115:1
5.2 lnc-LCP2-6:1