Transcript: lnc-LCT-1:1

Basic information

LNCipedia transcript ID: lnc-LCT-1:1 
LNCipedia gene ID: lnc-LCT-1
Location (hg19): chr2:136605726-136609515
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 577 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT074605
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -143.3109 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LCT-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LCT-1:1
4.0 lnc-LCT-1:1
4.1 lnc-LCT-1:1
5.0 lnc-LCT-1:1
5.1 lnc-PRSS40B-61:1
5.2 lnc-LCT-1:1