Transcript: lnc-LEF1-1:6

Basic information

LNCipedia transcript ID: lnc-LEF1-1:6 
LNCipedia gene ID: lnc-LEF1-1
Location (hg19): chr4:108969456-108999538
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 916 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT097737
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 430.7296 coding 
CPAT coding probability 16.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LEF1-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PAPSS1-1:5
4.0 lnc-LEF1-1:6
4.1 lnc-LEF1-1:6
5.0 lnc-LEF1-1:6
5.1 lnc-TIFA-32:6
5.2 lnc-LEF1-1:6