Transcript: lnc-LEF1-3:19

Basic information

LNCipedia transcript ID: lnc-LEF1-3:19 
LNCipedia gene ID: lnc-LEF1-3
Location (hg19): chr4:108784635-108853274
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2809 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000245293.2|ENST00000499098.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 20.3576 non-coding 
CPAT coding probability 4.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LEF1-3:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LEF1-3:19
5.0 lnc-LEF1-3:19
5.1 lnc-TIFA-33:19
5.2 lnc-LEF1-3:19