Transcript: lnc-LEF1-4:5

Basic information

LNCipedia transcript ID: lnc-LEF1-4:5 
LNCipedia gene ID: lnc-LEF1-4
Location (hg19): chr4:109257412-109276868
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4287 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000073376.1|MICT00000269293.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -120.2463 non-coding 
CPAT coding probability 4.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LEF1-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LEF1-4:5
5.0 lnc-LEF1-4:5
5.1 lnc-TIFA-31:2
5.2 lnc-LEF1-4:5